ResearchResearch paperEfficiency & Inference1 source · Oct 8, 2026

MAST: Motif-Augmented Diffusion with Search Tree for Spectroscopic Molecular Structure Elucidation

To address these limitations, we propose MAST, a Motif-Augmented diffusion framework with Search Tree, for joint 2D-3D spectroscopic molecular structure elucidation.

Key points

  • Elucidating molecular structures from spectra is a foundational problem in chemical and materials characterization, yet remains challenging due to spectral ambiguity and the vast molecular space.
  • Although recent diffusion-based generators show strong promise for spectra-conditioned elucidation, existing methods struggle to learn robust spectra-structure relationships from limited paired data when relying solely on global spectral representation.
  • MAST introduces explicit, interpretable motif priors as intermediate evidences throughout denoising, reducing conditional ambiguity and facilitating spectra-conditioned optimization.
  • We further cast diffusion sampling as reward-guided tree search to prioritize high-reward denoising trajectories, yielding a compact set of spectra-consistent candidates under limited budgets.

Sources (1)

  • [1]MAST: Motif-Augmented Diffusion with Search Tree for Spectroscopic Molecular Structure Elucidation
    arXiv (AI, ML, NLP, CV, robotics, multi-agent) · Oct 8, 02:45 PM
    To address these limitations, we propose MAST, a Motif-Augmented diffusion framework with Search Tree, for joint 2D-3D spectroscopic molecular structure elucidation.
    Elucidating molecular structures from spectra is a foundational problem in chemical and materials characterization, yet remains challenging due to spectral ambiguity and the vast molecular space.

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